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Official Journal of the Human Genome Organisation

Table 4 Karyotyping––Cost of reporting different scenarios

From: Diagnosing idiopathic learning disability: a cost-effectiveness analysis of microarray technology in the National Health Service of the United Kingdom

Scenarioa

Cost of Karyotypingb

Cost of Multi-telomere MLPAb

Cost of Multi-telomere FISHb

Cost of Targeted telomere FISHb

Total costa

1 No genome imbalance found.

£117 (£103–£131)

£117 (£103–£131)

2 Genome imbalance found of known clinical relevance.

£117(£103–£131)

£117 (£103–£131)

3 Genome imbalance found of unknownclinical relevance. Parental samples karyotyped. Imbalance confirmed as inherited or ‘de novo’.

£351 (£309– £393) (3 tests)

£351 (£309–£393) (3 tests)

4 No genome imbalance found. Multi-telomere MLPA test performed. No imbalance found.

£117 (£103–£131)

£45 (£40–£50)

£162 (£143–£181)

5 No genome imbalance found. Multi-telomere FISH test performed. No imbalance found.

£117 (£103–£131)

£283 (£254–£313)

£400 (£357–£444)

6 No genome imbalance found. Multi-telomere MLPA test performed. Genome imbalance found. Parental samples tested by Multi-telomere MLPA. Imbalance identified as clinically benign (normal parent carries identical anomaly) or imbalance confirmed ‘de novo’ by FISH and likeky to be clinically relevant.

£117 (£103–£131)

£45 (£40–£50)

£220 (£200–£240) (max. 2 tests)

£472 (£423–£521)

7 No genome imbalance found. Multi-telomere FISH test performed. Genome imbalance found. Parental samples tested by Targeted telomere FISH. Imbalance identified as clinically benign (normal parent carries identical anomaly) or clinically relevant.

£117 (£103–£131)

£283 (£254–£313)

£324c (£304–£344) (max. 4 tests)

£724 (£661–£788)

  1. Scenarios 1–3: stand-alone karyotyping. Scenarios 4–7: karyotyping plus multi-telomere testing approach (FISH or MLPA)
  2. b Cost ranges given in parentheses
  3. The cost of a single telomere test (£110) is significantly more than testing the same telomere again (£52) due to the initial cost of growing glycerols and preparing the probe ‘in house’.