Official Journal of the Human Genome Organisation
Table 4 List of SNPs (UTR mRNA) predicted to be functionally significant by FastSNP
Gene | SNP ID | Nucleotide change | mRNA position | UTR position | Level of risk | Possible functional effects |
|---|---|---|---|---|---|---|
KCNE1 | rs41315349 | C → T | 251 | 5′UTR | Moderate–high (3–4) | Splicing site |
rs41314819 | A → G | 526 | 5′UTR | Very low–medium (1–3) | Promoter/regulatory region | |
rs41315471 | C → T | 373 | 5′UTR | Very low–medium (1–3) | Promoter/regulatory region | |
rs41315473 | A → G | 95 | 5′UTR | Very low–medium (1–3) | Promoter/regulatory region | |
KCNE2 | rs41260744 | A → G | 62 | 5′UTR | Very low–medium (1–3) | Promoter/regulatory region |